Insertion junction: CLIP2.049210_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.049210
Chromosome:chromosome 6
Location:3747977
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278164 (1 of 40) 3.4.24.38 - Gametolysin / Lysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACCAAGGGCAAGTACGACATCACCAAGAGCTGCGCCGACCCCGAACT
Internal bar code:CCCGTGCGGGTAGCAGAGCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1887
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACGTTTGCCTGTGAAAG
Suggested primer 2:CCAGTCGTTCGTGAACCTGA