Insertion junction: CLIP2.049213_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.049213
Chromosome:chromosome 11
Location:3589785
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g478050 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACACATACACGCATGCCCATGTCAGCTGCATCCATCGACCCATGCACGC
Internal bar code:GTGCCGAGGATCTTGAATTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1261
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGTCATCACCAGCTGCAT
Suggested primer 2:CAGCAAGACACACGGTTTCG