Insertion junction: CLIP2.049214_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049214
Chromosome:chromosome 9
Location:5840839
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411600 (1 of 3) IPR000104//IPR001005//IPR009057//IPR017877//IPR017930 - Antifreeze protein, type I // SANT/Myb domain // Homeodomain-like // Myb-like domain // Myb domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTCTACGTGCAGGCCCTGGGGGTGAGAGCGGCAGGGTGGGCGCAGCAA
Internal bar code:TGAGTTGTTCGTAATCAATAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:194
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGTCGCTGTGTACATGG
Suggested primer 2:AAACAATGCACACGCCTGAC