Insertion junction: CLIP2.049215_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.049215
Chromosome:chromosome 11
Location:1055775
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467666 LCI13,GT90F43,GT90-43 Low-CO2-inducible 13; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAAGTTGCACGGGTCCCACGGGATGTGTGGGGCTTGTGGGATCCGCAC
Internal bar code:TCCCTGTAGTGCTGGTTGGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1251
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCTCAGAGGATGATGTCG
Suggested primer 2:GCCGATAAATTCGTGTGGCC