Insertion junction: CLIP2.049224_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049224
Chromosome:chromosome 1
Location:4160591
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g027764 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCGCTCTACAACTGGTTCTTTGTGTACCAGTGAGTGGAGCCCCGCGT
Internal bar code:CGGTTTCACGATCTGACACCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:329
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTGACCGTCAAGAGTCA
Suggested primer 2:GCCAAGAACTACCCCATGCT