Insertion junction: CLIP2.049231_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049231
Chromosome:chromosome 1
Location:3833589
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g025100 PGP9 (1 of 1) PTHR18901//PTHR18901:SF22 - 2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2 // SUBFAMILY NOT NAMED; Putative phosphoglycolate phosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGTATGCTTGTGCCCATGACCTGCAATACTCGATGGCGGCGCTAACGG
Internal bar code:TTATCATGGGATTGTGGTGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4025
LEAP-Seq percent confirming:94.8718
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACAGCCTGCAGGTAATG
Suggested primer 2:CTGCAATAATCGCTGGGCAC