Insertion junction: CLIP2.049239_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049239
Chromosome:chromosome 16
Location:6227436
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00152018

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGATGGTCAGGGGAGTGACCCATGAACCCGGTAAGGGACCGCCTGCA
Internal bar code:GGTTAAGGGTGTGCTAATCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3902
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CTATTAGAAACCCGCCCGCT
Suggested primer 2:TCCGTGAAGCGATTGTTGGA