Insertion junction: CLIP2.049242_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049242
Chromosome:chromosome 2
Location:5824893
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800243 CDS
lncRNA_TCONS_00041141 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGACGCAGCCCGCCACCTTCCTATGAAAGCCATCCGCTCGAGCCGGTC
Internal bar code:GTCGCATACTTTTCTTCGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2847
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GATGACGGATGGCTGCCATA
Suggested primer 2:CTCTGCACGTGTTCCTGACT