Insertion junction: CLIP2.049244_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049244
Chromosome:chromosome 13
Location:3368440
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586650 FXL1 FixL-like PAS domain protein; (1 of 12) 2.7.13.3 - Histidine kinase / Protein kinase (histidine) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAACGGGGTCGTGCTTCACGTCCTCCAGGAACTTGCCGTAGCAGCGCAG
Internal bar code:GCGTTAGCATCAGCTCCGTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4700
LEAP-Seq percent confirming:98.4848
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGCATCCTAGAGACTGTC
Suggested primer 2:GGATGGATGCTGGTACCGAG