Insertion junction: CLIP2.049244_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049244
Chromosome:chromosome 13
Location:3368458
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586650 FXL1 FixL-like PAS domain protein; (1 of 12) 2.7.13.3 - Histidine kinase / Protein kinase (histidine) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGGCCTCGCGCAACGGCGGCGGCGACGCCATCATGAACCTGGACCTGA
Internal bar code:ATAACCGTTAAAATTCGAATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5046
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGGATGCTGGTACCGAG
Suggested primer 2:GCGGCATCCTAGAGACTGTC