Insertion junction: CLIP2.049246_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049246
Chromosome:chromosome 9
Location:6540261
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g415950 PRPL6,uL6m,MRPL6 (1 of 1) K02933 - large subunit ribosomal protein L6 (RP-L6, MRPL6, rplF); Mitochondrial/chloroplast ribosomal protein L10 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTCCCAGCGGCGACCCCAGTCCGCGACCACACACACCTGCTCAATCTT
Internal bar code:TGAATTTGCTACCTGAATCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:209
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGACCACTCGTGTTAAGCCC
Suggested primer 2:CAGTGAGCAAACAAACCCCG