Insertion junction: CLIP2.049251_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049251
Chromosome:chromosome 10
Location:3319864
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g443300 CNK5 NimA-related protein kinase; (1 of 1) PTHR24361//PTHR24361:SF368 - MITOGEN-ACTIVATED KINASE KINASE KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGTCGCTGGGCTGCGTGCTGTACGAGCTGTGCACACTCAGGTGGGCAC
Internal bar code:ACGCGGGAAGGCTAATCTAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1028
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGTGCACTCCAGCTGTAC
Suggested primer 2:CCGTGAGTCCTTTGTCGACA