Insertion junction: CLIP2.049256_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049256
Chromosome:chromosome 3
Location:7805121
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g203100 (1 of 1) IPR000253//IPR027417 - Forkhead-associated (FHA) domain // P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGACCAGCACTGCTCCTGCTGCTGCCATGGCTGCTGTGGCTGCTGCTG
Internal bar code:TTGACGGCGAGAGTCTACCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3202
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTCCTTTTGCACTCGGGA
Suggested primer 2:AGCAATGCCGTTGTTGACAC