Insertion junction: CLIP2.049257_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049257
Chromosome:chromosome 16
Location:2042663
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656950 (1 of 1) PTHR13140:SF300 - PROTEIN TAG-278-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGATGCCAAAGCCGGTGCTGCCCACGGATGGCAGCACAGGTGTGGCCTT
Internal bar code:TGAGGGGATTAGTTGTATTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1128
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAGGTGGTGATGATGCCC
Suggested primer 2:TGCATGCTGTACTGGTGAGG