Insertion junction: CLIP2.049259_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.049259
Chromosome:chromosome 9
Location:3852199
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801035 (1 of 3) IPR000104//IPR001054//IPR006059//IPR029787 - Antifreeze protein, type I // Adenylyl cyclase class-3/4/guanylyl cyclase // Solute-binding family 1 // Nucleotide cyclase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGCTTGCTCCGCATGTGTGGGTGTCTTGTGAAACACGCCTACGCACG
Internal bar code:TGCACAGCCTAGATTAGGTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:254
LEAP-Seq percent confirming:32.3529
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTCTTGTGCTGTTGTGC
Suggested primer 2:CGCCGCATTTCGTCAATCAT