Insertion junction: CLIP2.049271_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049271
Chromosome:chromosome 6
Location:5301803
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g284700 AAT2 Alanine aminotransferase; (1 of 1) K00814 - alanine transaminase (GPT, ALT) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGGTTGCCGATGTTGCACCACACCACCTTGTCGAACGGGTGGTTGTG
Internal bar code:AGCCCAGGTCCTTATGCAGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2111
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCCTGGAGGTTCTTTCCC
Suggested primer 2:AGCTGAACGTCCTGCCAATG