Insertion junction: CLIP2.049283_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049283
Chromosome:chromosome 17
Location:4717011
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g732900 (1 of 1) IPR000104//IPR001126 - Antifreeze protein, type I // UmuC domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGACGTAACGGTTTTAGTGCCGAAACACAACAGTGTGCACATCCCCA
Internal bar code:AGAGGGTTTAATTGTGTGCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3626
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:AACCTCTGCCGGTACCATTG
Suggested primer 2:GGGTTAGGGGGTGGATTTGG