Insertion junction: CLIP2.049287_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049287
Chromosome:mitogenome
Location:10753
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreMt.g802343 ChrepMp07,nad1,801499 NADH dehydrogenase subunit 1; (1 of 1) K03878 - NADH-ubiquinone oxidoreductase chain 1 (ND1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGGTATCTTATGAGTTGAGTTTGGGTGCTGCTTTGCTATCTATCGGTC
Internal bar code:CCCTGGGTCTGGTCGGGTTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3479
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGAGTCCATACAAAAGCG
Suggested primer 2:AAGGGGCCACGGTTCTTATG