Insertion junction: CLIP2.049290_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.049290
Chromosome:chromosome 14
Location:4015047
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g633300 (1 of 1) IPR003582//IPR006626//IPR009030 - ShKT domain // Parallel beta-helix repeat // Insulin-like growth factor binding protein, N-terminal CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGGCGGCCCTAGCAGCCTACCAGGCAGACATGCGGCTGCAACTGATAC
Internal bar code:GGAGAGCGTGTCCGGTTCTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:634
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGACACACACACACACA
Suggested primer 2:GTAGCACCTCCATTGGCAGT