Insertion junction: CLIP2.049292_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.049292
Chromosome:chromosome 12
Location:5979056
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534100 COL,CON2 (1 of 3) PTHR31319//PTHR31319:SF10 - FAMILY NOT NAMED // ZINC FINGER PROTEIN CONSTANS-RELATED; CONSTANS-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGTCCAGCGCAGCACGGATTGAAATGACAATGTAGCAGCGATAGTTA
Internal bar code:TGTAGATCGTAATTTTCAATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1922
LEAP-Seq percent confirming:86.2069
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGAATTTACGCGCTTGGG
Suggested primer 2:GTGGCAGTAGATCGTCGAGG