Insertion junction: CLIP2.049303_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049303
Chromosome:chromosome 4
Location:1549315
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213450 VPS2A Subunit of the ESCRT-III complex; (1 of 1) K12191 - charged multivesicular body protein 2A (CHMP2A) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCTAGATGTTGGAAAGAGCCAGGAATCAAGAACAGAAAGGCACGATG
Internal bar code:CGATGAGTAGGTTTAGGAAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2212
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGAGCTACAAGCATGGGT
Suggested primer 2:ATGGTGAGGATGGGCTTTGG