Insertion junction: CLIP2.049323_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049323
Chromosome:chromosome 3
Location:2108154
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g156550 (1 of 1) PTHR22829//PTHR34826 - DEP DOMAIN PROTEIN // FAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCCATGGCAACGGCAACAGTCAATGGCACATGGTGACAACCAGGCGAC
Internal bar code:ACATCCTCTTGCTCCCCATGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3282
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTCCTCCTTCCTCCTCC
Suggested primer 2:GTCAGCAAGCCAGGGTTTTG