Insertion junction: CLIP2.049338_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049338
Chromosome:chromosome 7
Location:3311907
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334700 ATG101 (1 of 1) PF07855 - Protein of unknown function (DUF1649) (DUF1649); Autophagy-related protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAAATGCGCGACTCCACTCGAGCTTCCACGGCGGGGTCACCGCACTTG
Internal bar code:GATTATAAAACGTCCCATGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3717
LEAP-Seq percent confirming:80.8219
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGCAGTACGTGTAAGCT
Suggested primer 2:CAGTAGAGCCGCTCATCCTG