Insertion junction: CLIP2.049340_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.049340
Chromosome:chromosome 5
Location:1112805
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g248150 PGA2 1-acylglycerophosphocholine O-acyltransferase; (1 of 3) 2.3.1.25 - Plasmalogen synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAAGCCTCCGAATCGCCGAAGGGCGTCTTCAGCTCTATGAAAGGAGAA
Internal bar code:TCCCCCGAAATTCAACCTTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1225
LEAP-Seq percent confirming:97.3684
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCGCGAACGAATTTGTAT
Suggested primer 2:GCCATACACACCATGGGGAA