Insertion junction: CLIP2.049351_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.049351
Chromosome:plastome
Location:202173
Confidence (%):63
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGTTTACTTGCCTCCTTCGGAGTATATAAATATCCCGAAGGGGAAGGA
Internal bar code:GAGTGAGTCCTATTTTCACACC

Confirmation - LEAP-Seq

LEAP-Seq distance:52
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TATCGAGCAGCCCCGAAAAG
Suggested primer 2:ACGCGTACACAACCCTTGAT