Insertion junction: CLIP2.049355_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049355
Chromosome:chromosome 3
Location:8818273
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206593 (1 of 110) 3.4.19.12 - Ubiquitinyl hydrolase 1 / Ubiquitin thiolesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAAAATGGGCTGAGTCAGCAGGGTCGCATGCGCGGGCAGAGAATTGCC
Internal bar code:TGTACATATGGGAATTTGTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2328
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCTAGGGACACGAAACC
Suggested primer 2:CCTGGCTCACGTCACTCAAT