Insertion junction: CLIP2.049356_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.049356
Chromosome:chromosome 6
Location:1613014
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g261550 (1 of 1) PF06694 - Plant nuclear matrix protein 1 (NMP1) (Plant_NMP1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCATCGGCGCTCTGCGTGCCTTAGTGTAAAAGAGCTCAAGGGGATCGAA
Internal bar code:GTAACAGCGATCCGAAGTCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:203
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCACAGTCACCAAGCAC
Suggested primer 2:CGACACAGCCAATGTTTGCA