Insertion junction: CLIP2.049359_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049359
Chromosome:chromosome 14
Location:1940881
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g620500 (1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCAAAGTTCCCACAAGATTCCTCGACAGGCTTCGAGGCCGCTGGCTCA
Internal bar code:CGAGGGGGATTTTTCCGTGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2964
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCATTCAAATGCTCGAGG
Suggested primer 2:GGTACTGCTCCTCCTCCTGA