Insertion junction: CLIP2.049359_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049359
Chromosome:chromosome 14
Location:1940883
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g620500 (1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTGGATTGGCACGTTCAAGACTGCTGAGGAGGCTGCACGGGCGTACGA
Internal bar code:CTTATATACTTGAGTTATGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:5284
LEAP-Seq percent confirming:47.619
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GGTACTGCTCCTCCTCCTGA
Suggested primer 2:CGCCATTCAAATGCTCGAGG