Insertion junction: CLIP2.049364_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049364
Chromosome:chromosome 3
Location:5519264
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g184950 MAW3 Membrane-associated hydroxyproline-rich glycoprotein 3 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGATGGCCAAGCTGCGCCGCCCCCCGCTGGTGGCGAATGGGTGGAGC
Internal bar code:CAATTTCTTTTCTTGTGCCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1704
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CGATCAGGGTCGAGTACAGC
Suggested primer 2:CTGGAGGCTGTCTTCAACGT