Insertion junction: CLIP2.049376_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.049376
Chromosome:chromosome 2
Location:7218048
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390912 (1 of 54) IPR001680//IPR017986 - WD40 repeat // WD40-repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGGTGAGGGGGGAACGCAGGGAAAGTTCGGCCTTTAGGCGGTTATCGA
Internal bar code:ATTTTGCAACGGTTGCCCCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1222
LEAP-Seq percent confirming:77.2727
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CATTATTGTGTCGGGCGCTG
Suggested primer 2:ATGCGTCTATGCCGTGTAGG