Insertion junction: CLIP2.049379_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049379
Chromosome:chromosome 3
Location:1677072
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g153050 RWP1 (1 of 1) IPR000104//IPR003035 - Antifreeze protein, type I // RWP-RK domain; RWP-RK transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCAAACCGGCGGCCATGCCGGCGCTCATGGTAGAAGGCTGGCCCTGCA
Internal bar code:AGGCACGTGAGAACGTTTTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3772
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:117
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:117

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTTCGACGGTTTATTGCC
Suggested primer 2:GGTACTGGTCACTCTGCACC