Insertion junction: CLIP2.049381_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049381
Chromosome:chromosome 6
Location:3862952
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278183 (1 of 1) PTHR23054//PTHR23054:SF14 - UNCHARACTERIZED // PROTEIN Y45F10A.7, ISOFORM A CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCGCTGCGCCGTGCTCATGCGGGTGAGGCGCAGCGCCACCAGCGCGTG
Internal bar code:AGGCATGAGTTGAGGCATCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3161
LEAP-Seq percent confirming:65.5556
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGTGTGAGTGTGACCGTG
Suggested primer 2:CGGGTTGTCGTTCTTCCAGA