Insertion junction: CLIP2.049393_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049393
Chromosome:chromosome 9
Location:2983733
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393395 (1 of 1) PTHR33477:SF3 - EMB|CAB72147.1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCCGCCATCAGCAGCAGCAGCCGGCGCGCTTGCGTCCACCTCCGCGG
Internal bar code:GGTCACCCAATAGATGTTGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:246
LEAP-Seq percent confirming:5.55556
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGGTAGACGGGGGATGAA
Suggested primer 2:ACCACTGCTCCGATGAAGTG