Insertion junction: CLIP2.049393_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049393
Chromosome:chromosome 9
Location:2983736
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393395 (1 of 1) PTHR33477:SF3 - EMB|CAB72147.1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCATTGCAGCCGGCACCGCCTTACTCAAGCTGTTTGACTCCCATTCGCC
Internal bar code:TTATATTTTACGCACGTCCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:5234
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACCACTGCTCCGATGAAGTG
Suggested primer 2:AGTGGTAGACGGGGGATGAA