Insertion junction: CLIP2.049403_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.049403
Chromosome:chromosome 8
Location:3448843
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g378450 (1 of 1) IPR000104//IPR000679 - Antifreeze protein, type I // Zinc finger, GATA-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGTGGCTTCGGAGTGGCGGGCAGAACAGGAGGCGGAGGCGGGCGCGCC
Internal bar code:TGTATTAGCTGCTCAATTGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:929
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAGATGTTGTGGGCGAGG
Suggested primer 2:TCATCCGTTTGTCCCCATGG