Insertion junction: CLIP2.049405_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049405
Chromosome:chromosome 17
Location:5645823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g740100 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCGACCAGGTGCAGGCACGCCAGCTCCAGCTCCTCACCGGCCTTGCCC
Internal bar code:TATGATGTGTATCCTCCGGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3797
LEAP-Seq percent confirming:75.6098
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:TTACTGCTGGTTGCCCTGAG
Suggested primer 2:CATGCGACCATGCCTAGCTA