Insertion junction: CLIP2.049406_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049406
Chromosome:chromosome 13
Location:2751913
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g582250 (1 of 1) 3.2.1.96 - Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase / Endo-beta-N-acetylglucosaminidase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCAAGGCAGCCAGCAAGCAGCAGAAGCTGGCGGCGGCGTCGGAGGCTG
Internal bar code:CTGGGTGGTGTTCTATTTACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:239
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GATCCCTACCCCCAATCCCT
Suggested primer 2:CGGAAGAGGATGACGACTGG