Insertion junction: CLIP2.049409_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049409
Chromosome:chromosome 12
Location:4848637
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g523600 (1 of 3) PTHR13367//PTHR13367:SF8 - TUMOR NECROSIS FACTOR-RELATED // OTU DOMAIN-CONTAINING PROTEIN 7B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGGAGACGCTGAGGAAGGTATGGATGAAGCGCGGCTCCTCAAATTTGG
Internal bar code:CGCATAGGATGAAGAGTTCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3480
LEAP-Seq percent confirming:94.8276
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGCCCAAGGACATTACT
Suggested primer 2:ACGCTGACTGCTACCTTTCC