Insertion junction: CLIP2.049412_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.049412
Chromosome:chromosome 9
Location:4579717
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401367 (1 of 1) PTHR15189:SF7 - BRCA1-A COMPLEX SUBUNIT BRE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTAGTCATGAATGTCACCCATGCCCCCATGTACAGATCGACGCGCACT
Internal bar code:GAGTGGTGGCTGCCTCCTCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:521
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCCTATTTGGGGGTTGG
Suggested primer 2:AGGGCGTGAGGTTAGTTGTG