Insertion junction: CLIP2.049412_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049412
Chromosome:chromosome 9
Location:4579744
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401367 (1 of 1) PTHR15189:SF7 - BRCA1-A COMPLEX SUBUNIT BRE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTACAGCAGGCGCGTCGTTACCGATACTGCGACAGGCGTGCCGGTACT
Internal bar code:GAGTGGTGGCTGCCTCCTCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3320
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGCGTGAGGTTAGTTGTG
Suggested primer 2:ATGGCCTATTTGGGGGTTGG