Insertion junction: CLIP2.049413_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.049413
Chromosome:chromosome 12
Location:5784297
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532750 EEP8 (1 of 1) K10772 - AP endonuclease 2 (APEX2); Endonuclease/exonuclease/phosphatase family protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCGGGAGTGGCCACCTTCTGCCGTCGTGCGCCCGGAGCACTGCCGCTG
Internal bar code:GTTGTTATACGGGCTTACGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:89
LEAP-Seq percent confirming:7.14286
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCCTCCTCCTCGTCTTCC
Suggested primer 2:TCCGTAGAGTAATCGCGCAC