Insertion junction: CLIP2.049416_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049416
Chromosome:chromosome 7
Location:945333
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319150 PTP4 Protein tyrosine phosphatase; (1 of 2) PTHR10367 - MRNA-CAPPING ENZYME intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGATTAGACAGATGTGTTTTGGTGCGTGTTCTTAATGAAGTTAATGAA
Internal bar code:CCGAAGGTCGGTACGTTGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:510
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAGGTAGCAGCACACCAC
Suggested primer 2:GTGTGTGAGGACCTGACCAG