Insertion junction: CLIP2.049421_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049421
Chromosome:chromosome 7
Location:3749146
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g338200 (1 of 2) K17579 - protein phosphatase 1 regulatory subunit 42 (PPP1R42, LRRC67) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTTCTGCCACTGCAGGCAGCCCAAATACCGCGACACCATCATCCTCAT
Internal bar code:CGGCGGGCCAGGTGACAGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1978
LEAP-Seq percent confirming:37.8378
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCCTCCTCCTTGAGCTCC
Suggested primer 2:ATCTCACATCCTGCCTCCCT