Insertion junction: CLIP2.049421_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049421
Chromosome:chromosome 7
Location:3749157
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g338200 (1 of 2) K17579 - protein phosphatase 1 regulatory subunit 42 (PPP1R42, LRRC67) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCAGCCCCGGGGATCTTACGTGCTGGCCTAACGGCGGAGTGATTGGAT
Internal bar code:CTTCCTCCAAAACACTCATCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:669
LEAP-Seq percent confirming:44.898
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTCACATCCTGCCTCCCT
Suggested primer 2:TCTCCTCCTCCTTGAGCTCC