Insertion junction: CLIP2.049427_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.049427
Chromosome:chromosome 12
Location:5840510
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533250 (1 of 2) IPR000104//IPR001394//IPR028889 - Antifreeze protein, type I // Peptidase C19, ubiquitin carboxyl-terminal hydrolase // Ubiquitin specific protease domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACAAGGGACAAGGTATTAGGAGGCGGGAGAGGATTGGGTGGAAGTGGC
Internal bar code:GCGGGTGATCGTGCGCCGAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:411
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAAGACCAAGACCAAGGA
Suggested primer 2:CATCAGACGCCGAGGAAGAG