Insertion junction: CLIP2.049428_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.049428
Chromosome:chromosome 10
Location:3859896
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446050 (1 of 8) PF01697 - Glycosyltransferase family 92 (Glyco_transf_92) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGTGTAGCTGCAAGGGCGGGGAAAGCCGGGGAGACAAAGCCGCCAGC
Internal bar code:TAGGCGGGATAGAGTTTCGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:172
LEAP-Seq percent confirming:23.0769
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCCCATGAGTGCACTTGG
Suggested primer 2:TGGTGGACTTCTACGCAACC