Insertion junction: CLIP2.049430_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049430
Chromosome:chromosome 7
Location:2396340
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g328700 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGCGAGCCTGCGCTGGCACCGTCGCCAGGCAGATAGCGAGTGCCAGGA
Internal bar code:TCGGGTTCCAGAGCGGTACAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2277
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCTCAAACCGCGTGCTTA
Suggested primer 2:CGTCCTCCTCCTCCTCATCA