Insertion junction: CLIP2.049430_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049430
Chromosome:chromosome 7
Location:2396346
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g328700 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCTGGAGTCGTCGCCTGGCGCAGCTTCACGCGGCCTGCGCGCCAGCGC
Internal bar code:CAGAAAAGGTCCTGAGATTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:681
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCCTCCTCCTCCTCATCA
Suggested primer 2:AGTCTCAAACCGCGTGCTTA