Insertion junction: CLIP2.049433_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049433
Chromosome:chromosome 12
Location:7729996
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g554750 (1 of 5) IPR000626//IPR019956//IPR029071 - Ubiquitin domain // Ubiquitin // Ubiquitin-related domain; Ubiquitin-like Protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCTGGGGCGCCACAAATGCATGGCGCAAGCAGCCACACCTTGACCCCA
Internal bar code:CATGGCTAGAGGTTTACATGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1937
LEAP-Seq percent confirming:62.7451
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGATACCTGAGGTCACGA
Suggested primer 2:GGCGGTGGCGTTCAATTATC